Flexible Multidimensional Scaling and 'smacof' Extensions


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Documentation for package ‘smacofx’ version 1.20-1

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alscal ALSCAL - MDS via S-Stress Minimization
apostmds Approximate Power Stress MDS
apowerstressMin Approximate Power Stress MDS
apstressmds Approximate Power Stress MDS
apStressMin Approximate Power Stress MDS
apstressMin Approximate Power Stress MDS
BankingCrisesDistances Banking Crises Distances
bcmds Box-Cox MDS
bcsdistance Calculates the blended Chi-square distance matrix between n vectors
bcStressMin Box-Cox MDS
bcstressMin Box-Cox MDS
biplotmds.bcmds S3 method for bcmds objects
biplotmds.lmds S3 method for lmds objects
biplotmds.smacofP S3 method for smacofP objects
bootmds.smacofP MDS Bootstrap for smacofP objects
boxcoxmds Box-Cox MDS
clca Curvilinear Component Analysis (CLCA)
clda Curvilinear Distance Analysis (CLDA)
cmds Classical Scaling
cmdscale Wrapper to 'cmdscale' for S3 class
conf_adjust conf_adjust: a function to procrustes adjust two matrices
corpsepaint Corpse Paint
doubleCenter Double centering of a matrix
eCLCA Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
eCLDA Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
eCLPCA Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
eCLPDA Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
elscal Elastic Scaling SMACOF
enorm Explicit Normalization Normalizes distances
icExploreGen Exploring initial configurations in an agnostic way
jackmds.smacofP MDS Jackknife for smacofP objects
koller Responses to the SCC scale and CSII scale (n=1013).
lmds Local MDS
mkBmat Auxfunction1
mkPower Take matrix to a power
multiscale Multiscale SMACOF
multistart Multistart MDS function
opmds Nonlinear ratio MDS with optimal power of dissimilarities
pdist Squared p-distances
permtest.smacofP Permutation test for smacofP objects
plot.smacofP S3 plot method for smacofP objects
postmds Power Stress SMACOF
powerStressFast Power stress minimization by NEWUOA (nloptr)
powerStressMin Power Stress SMACOF
powerstressMin Power Stress SMACOF
procruster procruster: a procrustes function
pstressmds Power Stress SMACOF
pStressMin Power Stress SMACOF
pstressMin Power Stress SMACOF
ringdat Two interlocking rings
rpostmds Restricted Power Stress SMACOF
rpowerStressMin Restricted Power Stress SMACOF
rpowerstressMin Restricted Power Stress SMACOF
rpstressmds Restricted Power Stress SMACOF
rpStressMin Restricted Power Stress SMACOF
rpstressMin Restricted Power Stress SMACOF
rstress R stress SMACOF
rstressmds R stress SMACOF
rStressMin R stress SMACOF
rstressMin R stress SMACOF
sammon Wrapper to 'sammon' for S3 class
sammonmap Sammon Mapping SMACOF
scale_adjust Adjusts a configuration
secularEq Secular Equation
smacofxDeleteOne Helper function to conduct jackknife MDS
smdda Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
smds Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
so_eCLCA Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
so_eCLDA Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
so_eCLPCA Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
so_eCLPDA Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
so_smdda Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
so_smds Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
so_spmdda Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
so_spmds Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
spheredat Clelia curve on a sphere
spmdda Extended Curvilinear (Power) Distance Analysis (eCLPDA or eCLDA) aka Sparse (POST-)Multidimensional Distance Analysis (SPMDDA or SMDDA) either as self-organizing or not
spmds Extended Curvilinear (Power) Component Analysis aka Sparsified (POST-) Multidimensional Scaling (SPMDS or SMDS) either as self-organizing or not
spp Calculating stress per point
sqdist Squared distances
udat Noisy Data on a U Fold