Cleanet: Automated Doublet Detection and Classification for Cytometry Data

Automated method for doublet detection in flow or mass cytometry data, based on simulating doublets and finding events whose protein expression patterns are similar to the simulated doublets.

Version:	1.0.0
Depends:	R (≥ 3.5)
Imports:	Rcpp, RcppHNSW, ggplot2, dplyr, tidyr, readr, reshape2, tibble, magrittr, methods
LinkingTo:	Rcpp, RcppArmadillo
Suggests:	knitr, rmarkdown, vctrs
Published:	2024-12-19
DOI:	10.32614/CRAN.package.Cleanet
Author:	Matei Ionita [aut, cre]
Maintainer:	Matei Ionita <matei.ionita at gmail.com>
License:	GPL-3
NeedsCompilation:	yes
CRAN checks:	Cleanet results

Documentation:

Reference manual:	Cleanet.pdf
Vignettes:	Cleanet for Mass Cytometry (source, R code)

Downloads:

Package source:	Cleanet_1.0.0.tar.gz
Windows binaries:	r-devel: not available, r-release: Cleanet_1.0.0.zip, r-oldrel: Cleanet_1.0.0.zip
macOS binaries:	r-release (arm64): Cleanet_1.0.0.tgz, r-oldrel (arm64): Cleanet_1.0.0.tgz, r-release (x86_64): Cleanet_1.0.0.tgz, r-oldrel (x86_64): Cleanet_1.0.0.tgz

Linking:

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